NLP: Summarizing l-theanine articles

In this post I will describe my use of NLP (Natural language processing, not neuro-linguistic programming. Natural language processing is cool, while neuro-linguistic programming is some pseudoscience stuff) in the application of summarizing articles from the internet. Specifically, I chose the topic of l-theanine and psychiatry, as previously I have already summarized the Nootropics subreddit discussions on l-theanine. The next step, therefore, is to summarize existing articles on this topic.

Summarizing experience with green tea from the Nootropics subreddit

The first step was to perform an automated Google search for a specific term. I chose the term “l-theanine psychiatry” and set the number of unique urls to be 15. Some of the resulting urls are listed below:

Can L-Theanine Help Treat Symptoms of Bipolar Disorder?

Effects of L-Theanine Administration on Stress-Related Symptoms and Cognitive Functions in Healthy Adults: A Randomized Controlled Trial

L-theanine

How does the tea L-theanine buffer stress and anxiety

It can be seen that the article titles are quite relevant to our topic. The next step is formatting the text and summarizing the information.

The idea behind the summarization technique is calculating word frequencies for each word in the combined text of all articles (after stop words removal), and then selecting words in the top 10% of frequencies. These words will be the ones used in scoring each sentence. More frequent words will be given more importance, as they are deemed more relevant to the chosen topic, therefore sentences containing those words will receive higher scores. This is not a machine learning approach, but a basic frequency count method. In total, 148 words were used for sentence scoring. Some of the most frequent words (from all articles combined) are listed below:

Theanine, administration, effects, placebo, weeks, study, four, sleep, scores, cognitive, may, stress, function, fluency, studies, related, symptoms, participants, bacs, anxiety

BACS was one of the top frequent words, it stands for the Brief Assessment of Cognition in Schizophrenia. Once each sentence was scores, 15 highest scoring sentences were selected in order to create a summary. The summary of the articles is presented below. From the summary we can infer that l-theanine was studied for its effects on cognition, anxiety, and stress. Some studies had positive results, indicating that l-theanine performed significantly better than placebo in regards to positive cognitive effects such as improved verbal fluency and executive function. Studies also noted significant improvements in stress reduction with the use of l-theanine. Other studies did not find any significant differences between l-theanine and placebo.


Second, only about 20% of symptoms (the PSQI subscales) and cognitive functions (the BACS verbal fluency, especially letter fluency and executive function) scores showed significant changes after L- theanine administration compared to the placebo administration, suggesting that the effects are not large on daily function of the participants.

Although psychotropic effects were observed in the current study, four weeks L-theanine administration had no significant effect on cortisol or immunoglobulin A levels in the saliva or serum, which was inconsistent with previous studies reporting that salivary cortisol [34] and immunoglobulin A [33] levels were reduced after acute L-theanine administration.

Considering the comparison to the placebo administration, the current study suggests that the score for the BACS verbal fluency, especially letter fluency, but not the Trail Making Test, Stroop test, or other BACS parameters, significantly changes in response to the 4 weeks effects of L-theanine.

The BACS verbal fluency, especially letter fluency (p = 0.001), and executive function scores were significantly increased after L-theanine administration (p = 0.001 and 0.031, respectively; ), while the Trail Making Test A and B scores were significantly improved after placebo administration (p = 0.042 and 0.038, respectively).

When score reductions in the stress-related symptoms were compared between L-theanine and placebo administrations, changes in the PSQI sleep latency, sleep disturbance, and use of sleep medication subscales were significantly greater (p = 0.0499, 0.046, and 0.047, respectively), while those in the SDS and PSQI scores showed a non-statistically significant trend towards greater improvement (p = 0.084 and 0.073, respectively), during the L-theanine period compared to placebo.

Stratified analyses revealed that scores for verbal fluency (p = 0.002), especially letter fluency (p = 0.002), increased after L-theanine administration, compared to the placebo administration, in individuals who were sub-grouped into the lower half by the median split based on the mean pretreatment scores.

Discussion In this placebo-controlled study, stress-related symptoms assessed with SDS, STAI-T, and PSQI scores decreased, while BACS verbal fluency and executive function scores improved following four weeks L-theanine administration.

The present study aimed to examine the effects of four weeks L-theanine administration (200 mg/day, four weeks) in a healthy population, i.e., individuals without any major psychiatric disorder.

The PSQI subscale scores for sleep latency, sleep disturbance, and use of sleep medication reduced after L-theanine administration, compared to the placebo administration (all p < 0.05).

The effects on stress-related symptoms were broad among the symptom indices presented in the study, although a comparison to the placebo administration somewhat limits the efficacy of L-theanine administration for some sleep disturbance measurements.

For cognitive functions, BACS verbal fluency and executive function scores improved after four weeks L-theanine administration.

PMID: 31623400 This randomized, placebo-controlled, crossover, and double-blind trial aimed to examine the possible effects of four weeks L-theanine administration on stress-related symptoms and cognitive functions in healthy adults.

The anti-stress effects of L-theanine (200 mg/day) have been observed following once- [ 33 , 34 ] and twice daily [ 35 ] administration, while its attention-improving effects have been observed in response to treatment of 100 mg/day on four separate days [ 36 ] and 200 mg/day single administration [ 37 ], which was further supported by decreased responses in functional magnetic resonance imaging [ 38 ].

These results suggest that four weeks L-theanine administration has positive effects on stress-related symptoms and cognitive function in a healthy population.

Summarizing experience with green tea from the Nootropics subreddit

We can’t all get our own labs with grad assistants and grants in order to conduct research, but that doesn’t mean there aren’t other ways to obtain data. Some might say that only studies with randomized trials with test and control groups matter, but I believe that subreddits can provide supplemental information. We should look at the data with a grain of salt, but a lot of people do describe sincerely their experiences with nootropics on reddit. Users also often link studies and scientific articles in the forums.

Not all nootropics are covered by randomized studies and rarely do psychiatrists collect data on experiences with nootropics. For these reasons people mostly discuss their experiences with nootopics and supplements online, in forums such as subreddits and Facebook groups. For example, there have not been many studies on lithium orotate, but probably thousands of people are taking it at the moment. There are very few published papers on this supplement, so how could one find out about possible benefits and side effects? Personally I had a good experience with very small doses of lithium orotate helping to reduce intrusive thoughts and reviving memories from the past. Where does information about my experience exist? Only in the Nootropics and depressionregimens subreddits. No psychiatrist or doctor was ever interested in my experience with microdosing lithium, but that doesn’t mean that this information could not be useful to someone else.

There are multiple Facebook groups specifically dedicated to topics such as treatment resistant depression, PMDD, borderline personality disorder, etc. There are a lot of discussions of supplements in those groups, but unfortunately I don’t know how to obtain data from Facebook. The good thing about reddit is that Reddit offers a free API that allows you to download data from subreddits, so you can get the titles of posts, text, and comments, up to about 1000 posts per subreddit per day. Thank you, Reddit! This is really great!

For this exercise, I decided to use natural language processing to summarize text from the Nootropics subreddit, filtering for posts about green tea. I used the subreddit to filter for posts which contained keywords from the following list: green tea, theanine, ltheanine, matcha, l-theanine, and l theanine. Matcha is a type of green tea powder, therefore still green tea, and l-theanine is a water soluble amino acid found in green tea. In total there were 730 posts in my dataset, with the post created dates ranging from September 2011 to January 2022.

Examples of post titles:

  • L Theanine cured my ( social) anxiety. I’m blown away. I’m usually socially awkward but I MASTERED a job interview.
  • Comprehensive List of GABAA Receptor Anxiolytics That Potentially Produce no Tolerance or Dependence.
  • Green tea supplement ruins man’s liver
  • Neurochemical and behavioral effects of green tea (Camellia sinensis): A model study Increased serotonin and dopamine metabolism
  • Why do 1-2 cups of green tea seem to anecdotally calm so many people down in this subreddit, even though there are only trace amounts of theanine in a cup?

Once the data was collected, the title and body were combined for each post and text processing was performed. Processing included removing accented characters, expanding common contractions, removing newlines, tabs, and special characters. Python’s spellchecker library was used in order to correct spelling errors.

The first summary method used was word frequencies and sentence scoring. All posts were combined together into one document, and the frequency of each word was calculated. In total there were 10,677 unique words/terms, but not each term was meaningful, and some appeared only several times. For this reason, only the top 5% most frequent words were selected in order to be used for sentence scoring. I also assigned higher scores to words green, tea, theanine, ltheanine, and matcha, in order to capture more posts that are more likely to focus on green tea.

The combined text was separated into individual sentences, and sentences were then scored by adding up the scores of each word in the sentences. As mentioned above, the top 5% most frequent words had scores assigned above 0, with the score being equal to the frequency. The remaining words were assigned a score of 0. Some of the most frequent words included anxiety, effects, ltheanine, day, good, sleep, caffeine, depression, tea, help, work, brain, and life.

Here are the resulting top ten sentences. Some resulting sentences were quite long, so I am pasting the sentence parts most relevant to green tea.

L-Theanine: Glutamate inhibitor * Increases glycine by 17.2% for one week * Increases -1-waves within 30-45m orally * At certain dosages, can increase GABA by 19.8% * Antagonizes AMPA and Kainate * [ * Partial co-agonist for NMDA, though significantly less potent than endogenous ligands * Blocks glutamate transporters(and therefore reuptake of glutamate and glutamine) * Not sedative in regular doses but promotes relaxation * Only those who have high baseline anxiety benefit from relaxation * Nontoxic and noncarcinogenic in very high doses (4g/kg).

L-Theanine + Taurine * Anti-excitatory and sedative * Highly bioavailable and consistent * L-Theanine + Taurine + Agmatine * Anti-excitatory and sedative * Highly bioavailable and consistent * Potentiates GABAergic and can suppress NMDA better than theanine * Anti-tolerance building * L-Theanine + Rosmarinic Acid * Both are anti-glutaminergic * Potent GABAA agonist comparable to benzos * Low total formula dose * 400mg L-Theanine + 150mg RA (1875mg Rosemary extract) * Taurine + Ashwagandha * GABAA potentiation of Taurine * NMDA suppression * L-Theanine + Taurine + Ashwagandha * GABAA potentiation of Taurine * Total glutamate suppression * Taurine + Magnolia * GABAA potentiated at benzo site plus influx of GABA in body * Apigenin + Magnolia * GABAA 1 agonist plus PAM * Both very potent * Chinese Skullcap + Magnolia * GABAA 2 + 3 agonist plus PAM * Chinese Skullcap + Apigenin + Magnolia * GABAA 1 + 2 + 3 agonist plus PAM EDIT: Added GABA-T and GAD explanations EDIT 2: Found new and more accurate evidence claiming that L-Theanine is actually an NMDA partial co-agonist, not an antagonist. This backs up sources that claim to see Ca2+ activity increase and become suppressed with NMDA antagonists. It also backs up sources finding L-Theanine to be an NMDA antagonist.

HELPED SOMEWHAT, OR NOT TOO SURE Cyamemazine (anxiety), alimemazine (sleep), magnesium L-threonate and glycinate (sleep), white noise (anxiety), SuperBetter app, vitamin D3, reading about Young schemas, ginkgo biloba (energy, focus), melatonin (sleep), chamomile (sleep), verbena (sleep), lavender (sleep), ALCAR, taurine, NAC, cannabis (sleep), gratitude journal, music (anxiety), coleus forskohlii (weight loss), CLA (from safflower, weight loss), metformin (weight loss, triggered an hypoglycemia the first time I tried it), green tea, risperidone (anxiety, cravings, irritability), L-methylfolate. DID NOT SEEM TO HELP Inositol, chromium picolinate, zinc, CoQ10, apple cider vinegar, meratrim (sphaeranthus indicus + garcinia mangostana), hydroxyzine, tiapride, binaural beats.
L-theanine :** Pretty good anxiolytic, and helps a bit with focus, especially when combined with coffee. Not too sedative.
 **CBD :** When L-theanine or skullcap is not quiet enough, can add some extra anxiolysis, but nothing spectacular either, and not enough on its own.

Medication and supplement augmentation suggestions. My diagnosis is Major Depression/Generalized Anxiety. Possibly on the light end of the Borderline spectrum. I also have Restless Leg Syndrome hence some of the meds. High Cholesterol and stage 2 hypertension. Current regimen is: Bupropion 100mg Lithium Carbonate 300mg (1 in morning, 2 before bed) Gabapentin 300mg (3 times a day) Pramipexole 1mg (at bedtime) Turmeric/bioperine 2000mg x2 Omega 3 Fish Oil 3,600mg x2 Vitamin D3 5,000IU x2 Vitamin C 500mg Multivitamin L-Theanine 200mg Kratom caps (4-6 size 00 about 3 times a week with at least a day between) Tianeptine 25mg (Monday, Wednesday, Friday only) Phenibut (1 size 00 Tuesday/Thursday only).

l-Theanine, Cannabis, Glutamate/GABA and Anxiety: Could this be a potential cure for Cannabis Induced Paranoia and Anxiety? Just a thought – But could Glutamate be responsible for the anxiety and paranoia commonly felt from cannabis? This is just under informed speculation, but THC has been found to increase striatal glutamate in the brain. ( L-Theanine has been found to “block” glutamate signaling in the brain. See here; >L-theanine relieves anxiety in large part because it bears a close resemblance to the brain-signaling chemical glutamate. L-theanine produces the opposite effect in the brain. >While glutamate is the brains most important excitatory neurotransmitter, L-theanine binds to the same brain cell receptors and blocks them to glutamates effects. This action produces inhibitory effects.1,2 That inhibition to brain overactivity has a calming, relaxing effect in which anxiety fades.3 > I have always noticed that when I take L-Theanine, it helps me get higher from cannabis, all while blocking any paranoia and anxiety that I get from it. Cannabis is the only drug I have found that is potentiated by L-Theanine. With other substances, I have noticed that L-Theanine blocks a lot of the pleasurable effects, while reducing anxiety (Namely when taken with stimulants, but also with Phenibut) Since Cannabis increases glutamate in the brain, and Glutamate is associated with anxiety, and L-Theanine essentially blocks it, could L-Theanine be a good anxiety and paranoia cure for weed? Will somebody with more knowledge on this subject help me out here?

How much trouble am I in when I show this to my PsyD? Venturing outside my personal echo chamber to solicit general opinions on my supplement regime. Cognizant that I am doing it wrong, but I will really feel that I am doing it wrong when I start getting grumpy. Please don’t hate me. L-Theanine 200mg L-Carnosine 1000mg Reishi Extract 2000mg Cats Claw 1000mg Alpha-lipoic acid 500mg Ashwagandha 250mg Synapsa Bacopa Monnieri 640mg N-acetyl l-cysteine 1200mg Palmitoylethnolamide 800mg Maitake mushroom extract 3000mg Chaga 3600mg Polygala Tenuifolia 200mg Lions mane 4200mg Acetyl l-carnitine 500mg Sarcosine 2000mg Wulinshen 1000mg.

Caffeine + L-Theanine. Like the beginners guide says, Id recommend this stack for anyone looking to wet their feet with nootropics. The 1 (Caffeine):2 (L-Theanine) ratio works well for me, but in order for me to really feel the L-Theanine I need to take it on a empty stomach. My favorite dosage is 200mg Caffeine and 400mg of L-Theanine immediately before writing. It helps me to be very relaxed, not filter my thoughts, and achieve a flow state. This stack combined with music from MajesticCasual or TheSoundYouNeed YouTube channels is pretty amazing for writing. BTW, for some people 400mg of L-Theanine is too much and may make you drowsy (though not for me). L-Theanine helps reduce anxiety, but I try to make sure I meditate instead of relying on L-Theanine. I save it for when I am writing.

Please give Dosage Guidance: Kava Kava – 700 MG Capsules (This I just ordered to try, not take daily, I have never tried Kava before) – Maybe 1x a day Sulbutiamine Capsules/Tablets 200 MG – 2 Capsules once a day (400 MG 1x a Day) Uridine Monophosphate Capsules 250mg – (500-750 MG 1x a Day) Agmatine Sulfate 250mg Capsules – Maybe start with 2 Capsules 1x a day? Agmatine Sulfate 1000mg Capsules – Only for going up on higher doses. L-Theanine 200 MG – 1x a Day Mens Daily Multimineral Multivitamin Supplement – 1x a Day Vitamin D3 5,000 IU – 1x a day Vitamin B Complex – 1x a day Magnesium Glycinate 400 MG – 1x a Day Omega 3 Fish Oil 4,080mg – EPA 1200mg + DHA 900mg Capsules – 1x a Day Kratom – 4 grams – 3x a day Ashwaghanda – KSM-66, 300mg, 2x a day. Ashwagandha – Sensoril 125mg Do not know dosage? Youtheory Sleep Powder Advanced, 6 Ounce Bottle – It has full doses of a few calming amino acids and some melatonin. TLDR: I want to quit my antidepressants, and purchased a bunch of Supplements to start taking while weaning off my meds, please give me help/tips on this journey, as well as check out the list and let me know if you recommend other supplements to try, or any tips on how to take these.

L-theanine has done wonders for me sleep, anxiety and productivity. With L-t I have had much better sleep due to increased relaxation and reduces anxiety. This has lead to much better and longer sleep, making me really productive at work. It is also helping a lot with anxiety from coffee, it is all but gone now. I just get the nice energy boost and focus boost with no anxiety effect. I usually take 1 or 2 pills of 225mg depending on how i feel. If I feel chill enough, I will only have 1 at night. If I feel the anxiety and neck tightness coming on from coffee I will take another one then.

Supplementation guide to stimulants. As I have some extensive experience with ADHD medication and stims (ADHD-PI diagnosed myself), over the years through research and trial and error I have built a list of supplements that works for mitigating side effects and minimizing comedown while enhancing their intended effects. I read a post about this a couple years ago and wanted to add my own twist to it in hopes of promoting harm reduction. The supplement + stim dosages here given are intended to be used for studying/productivity purposes, although this will still work if you are taking more than the therapeutic amount. If you have any inputs, advice or additions to the list I am happy to add them. Stimulants used for the purposes of studying SHOULD NOT be taken everyday to avoid dopaminergic downregulation. Three times a week at most is recommended to allow the body to regain homeostasis. Stimulants that these supplements can work for include: * Amphetamines (Adderall, Dexamphetamine, Methamphetamine) * Methylphenidates and Analogues (Focalin, Concerta/Ritalin, ethylphenidate, Isopropylphenidate) * Caffeine (Coffee, Tea, Caffeine Pills) (To a certain degree) * Eugeroics (Modafinil, Adrafinil, Armodafinil) (To a certain degree).
*L-Theanine (200mg/1-3x)\\***  (Reduces euphoria/ Reduces Jitters / Lowers Anxiety / Relaxation) (Anecdotal : Amazing supplement if you are an anxiety sensitive person, smooths out the experience) >[Effects of L-theanine on stress related symptoms and cognitive functions in healthy adults].

I think that given then simple method that was used to select these top sentences, the results can be viewed as pretty successful. No neural networks were applied here, only word frequencies were used to generate sentence scores, but by reading the results we can actually learn a lot about green tea as a nootropic. My first observation would be that people mostly talk about l-theanine and not green tea. This makes sense, since the nootropics subreddit is mostly about discussions on supplements in pill form. Another observation is that people try l-theanine hoping to reduce anxiety and improve sleep. Information was provided stating that l-theanine could be reducing anxiety by inhibiting glutamate, an excitatory neurotransmitter. One user mentioned that l-theanine helps them with THC induced paranoia and proposed that THC increases glutamate in the brain and l-theanine in turn decreases anxiety by reducing available glutamate. Other users also mention l-theanine helping them with the anxiety and jitteriness after drinking coffee. In terms of side-effects that were mentioned, sedation and drowsiness were some of them.

In conclusion, I was able to extract a pretty good summary of green tea/l-theanine by using a pretty simple word frequency method. Given that now I have this code, I can just change the supplement keywords and create a similar summary for any other supplement. It’s definitely much faster than scrolling through the subreddit, looking for relevant posts.

Green tea vs. infliximab and tracking thyroid antibodies

I continue to track my thyroid antibodies and I will post my results here in case this information will be useful for anyone. Trust me, I know how fluctuating thyroid hormones suck and what it means for you in terms of your mood, energy, sleep. Today is a work day and since my work place is quite formal, I should be there by 9am. Nine to five, the usual. Well I couldn’t fall asleep until 1am and woke up at 6am. I felt cold shivers and my palms were sweaty. I lay in bed for a while but it was no use, I could not fall back asleep. I did get to work slightly after 9, not very late, sat down in my cubicle, turned on my screens and stared at the code. What was I supposed to be doing today? I had forgotten. My hands continued to sweat and I had chills. Emotionally I felt as if a train had run over me. I couldn’t remember on what task I stopped at on Friday. I sensed such fatigue that I was finding it difficult to sit up straight.

Logically I knew the cause, it all happened as my endocrinologist said it would. After a period of hyperthyroidism, my TSH went to almost non-existent level and now instead of being too high, my thyroid hormones were quickly dropping. Lab test on February 1st showed that free T4 and total T3 were near their lower threshold and TSH was also low. Since TSH continues to be low, and it is the thyroid-stimulating hormone, it was not stimulating the thyroid enough to produce T3 and T4. Therefore it’s likely that today hormone levels were even lower and I went into hypothyroid state.

test_feb2019

So this is what’s going on with my thyroid. I think the hypothyroidism symptoms are definitely starts as I have been getting chills, freezing even when my thermostat is at 24 degrees, not having the energy to talk to people even though I did not want to stay home on a Friday night. In theory, according to my endocrinologist, after an acute hyperthyroidism again, there will be not enough thyroid hormones stores in the thyroid gland, and therefore levels will fall. After sometime function should restore to normal, but hypothyroid state could last 8 months. I will be waiting for this normalization and in the meantime I will keep trying to reduce inflammation, because what else is there left to do.

Recently I came across a paper on green tea and exercise intervention for arthritis patients. “One-hundred and twenty subjects who had a mean age of (60.7 ± 2.53 years) and had been diagnosed with rheumatoid arthritis at least ten years previously were randomly included in this study. Patients were treated with infliximab, green tea, or a supervised exercise program for six months. Disease activity markers as well as antioxidant activity of green tea extracts were estimated before supplementation using in vitro assays. [Results] Rheumatoid arthritis patients treated with green tea for 6 months alone or in combination with infliximab or an exercise program showed significant improvement in disease activity parameters, including C-reactive protein, and erythrocyte sedimentation rate, swollen and tender joints counts, and modified Stanford Health Assessment Questionnaire score, along with an increase in serum levels of bone resorption markers, i.e., deoxypyridinoline, amino-terminal telopeptide of type 1 collagen, and bone alkaline phosphatase, at 6 months of after initial treatment. The European League Against Rheumatism and American College of Rheumatology scores revealed more clinical improvement in the disease activity of rheumatoid arthritis patients treated with green tea along with exercise compared with rheumatoid arthritis patients treated with infliximab or exercise combinations.”

Green tea and exercise interventions as nondrug remedies in geriatric patients with rheumatoid arthritis

I know this is just one study and we should take the results with a grain of salt, but I see no harm in including green tea and exercise in your day. I want to note that I am not looking for only ‘natural’ treatments neither am I trying to prove that they are better. I am only looking for something that I can implement. When I was referred for IV corticosteroids treatment, I was happy to receive it and did see improvements. Since then I have not been prescribed any treatment even though I did ask for it. It’s possible that something like infliximab would work for me, but I have no access to it. I have Hashimoto’s thyroiditis, celiac disease, and autoimmune encephalopathy, but inflixiamab is a medication that is prescribed for rheumatoid arthritis.

Infliximab is a monoclonal antibody that suppresses some parts of the immune system. Infliximab is a lab made molecule that binds to a specific cytokine TNF-α (chemical messenger), which is one of the causes of autoimmune reaction. TNF-α is tumor necrosis factor aplha, a cell signaling protein involved in system inflammation. Wiki states that Dysregulation of TNF production has been implicated in a variety of human diseases including Alzheimer’s disease, cancer, major depression, psoriasis and inflammatory bowel disease (IBD). Though controversial, studies of depression and IBD are currently being linked to TNF levels.

Infliximab has to be given as IV and cannot be taken orally as it would be destroyed by the digestive system. In the US the cost is about $19,000 per month and is mainly prescribed to arthritis patients who have not responded to other therapy. No one is going to prescribe it to me here in Canada.

Therefore, given that I have not been prescribed any meds at this point, and my psych and neuro keep debating whether to place me on IVIG or not, for now I have to do things on my own. Also trying green tea and exercise of course doesn’t cancel out any other treatment that I might get. I continue with helminthic therapy and hopefully I will get an IVIG trial (intravenous immunoglobulin therapy).